Publications by Janne Nikkilä

2008

  • BOOKTITLE:
  • Proceedings of WCSB 2008, The Fifth International Workshop on Computational Systems Biology, Leipzig, Germany, 11-13 June
  • AUTHORS:
  • Nikkilä Janne,
  • Sysi-Aho Marko,
  • Ermolov Andrey,
  • Seppänen-Laakso Tuulikki,
  • Simell Olli,
  • Kaski Samuel,
  • Ore\vsi\vc Matej
  • JOURNAL:
  • Molecular Systems Biology
  • VOLUME:
  • 4
  • PAGES:
  • 197
  • [URL]

2007

  • BOOKTITLE:
  • Proceedings of GENSIPS 2007, The Fifth IEEE International Workshop on Genomic Signal Processing and Statistics, Tuusula, Finland, 10-12 June

2006

  • AUTHORS:
  • P Sipilä,
  • DA Pujianto,
  • R Shariatmadari,
  • J Nikkilä,
  • M Lehtoranta,
  • IT Huhtaniemi,
  • M Poutanen
  • JOURNAL:
  • Biological Reproduction
  • VOLUME:
  • 75
  • PAGES:
  • 240--51
  • BOOKTITLE:
  • Proceedings of Probabilistic Modeling and Machine Learning in Structural and Systems Biology (PMSB 2006)
  • PAGES:
  • 131-136

2005

  • JOURNAL:
  • IEEE/ACM Transactions on Computational Biology and Bioinformatics
  • VOLUME:
  • 2
  • PAGES:
  • 203-216
  • BOOKTITLE:
  • Proceedings of The 3rd TICSP Workshop on Computational Systems Biology
  • SERIES:
  • TICSP Series \#29
  • PAGES:
  • 49-50
  • BOOKTITLE:
  • Bioinformatics using Computational Intelligence Paradigms
  • PAGES:
  • 75--92
  • JOURNAL:
  • International Journal of Neural Systems
  • VOLUME:
  • 15
  • PAGES:
  • 237--246
  • [URL]
  • BOOKTITLE:
  • Proc. KRBIO05, Symposium on Knowledge Representation in Bioinformatics
  • PAGES:
  • 22-29
  • JOURNAL:
  • CSCnews, Information Technology for Science in Finland
  • VOLUME:
  • N/A
  • PAGES:
  • 24-26
  • BOOKTITLE:
  • ICSB 2005, 6th International Conference on Systems Biology, abstract proceedings
  • PAGES:
  • 249

2004

  • BOOKTITLE:
  • Machine Learning: ECML'04. Proceedings of the 15th European Conference on Machine Learning
  • PAGES:
  • 396-405
  • BOOKTITLE:
  • Proceedings of IDEAL04, Intelligent Data Engineering and Automated Learning
  • PAGES:
  • 92-98

2003

  • AUTHORS:
  • Nikkilä Janne,
  • Roos Christophe,
  • Sinkkonen Janne,
  • Kaski Samuel
  • BOOKTITLE:
  • Proceedings of ECCB'2003, European Conference on Computational Biology
  • PAGES:
  • 433-434
  • BOOKTITLE:
  • Intelligent Exploration of the Web
  • PAGES:
  • 136-151
  • AUTHORS:
  • Kaski Samuel,
  • Nikkilä Janne,
  • Oja Merja,
  • Venna Jarkko,
  • Törönen Petri,
  • Castrén Eero
  • JOURNAL:
  • BMC Bioinformatics
  • VOLUME:
  • 4

2002

  • AUTHORS:
  • Nikkilä Janne,
  • Törönen Petri,
  • Kaski Samuel,
  • Venna Jarkko,
  • Castrén Eero,
  • Wong Garry
  • JOURNAL:
  • Neural Networks
  • VOLUME:
  • 15
  • PAGES:
  • 953-966
  • BOOKTITLE:
  • Machine Learning: ECML 2002
  • PAGES:
  • 418-430
  • AUTHORS:
  • Oja Merja,
  • Nikkilä Janne,
  • Törönen Petri,
  • Wong Garry,
  • Castrén Eero,
  • Kaski Samuel
  • BOOKTITLE:
  • Computational and Statistical Approaches to Genomics
  • PAGES:
  • 65-78
  • AUTHORS:
  • Oja M.,
  • Törönen P.,
  • Nikkilä J.,
  • Castrén E.,
  • Kaski S.
  • BOOKTITLE:
  • Proceedings of Bioinformatics 2002, Bergen, Norway, April 4-7
  • PAGES:
  • 78
  • AUTHORS:
  • Oja Merja,
  • Nikkilä Janne,
  • Toronen Petri,
  • Castrén Eero,
  • Kaski Samuel
  • BOOKTITLE:
  • STeP 2002---Intelligence, the Art of Natural and Artificial. Proceedings of the 10th Finnish Artificial Intelligence Conference
  • PAGES:
  • 31-40

2001

  • AUTHORS:
  • Kaski Samuel,
  • Nikkilä Janne,
  • Törönen Petri,
  • Castren Eero,
  • Wong Garry
  • BOOKTITLE:
  • Proceedings of NSIP-01, IEEE-EURASIP Workshop on Nonlinear Signal and Image Processing, 03.06.2001 - 06.06.2001, Baltimore, Maryland USA
  • AUTHORS:
  • Nikkilä Janne,
  • Törönen Petri,
  • Sinkkonen Janne,
  • Kaski Samuel
  • BOOKTITLE:
  • Proceedings of Bioinformatics 2001, Skövde, Sweden, March 29-April 1
  • PAGES:
  • 2-3
  • BOOKTITLE:
  • Artificial Neural Networks---ICANN 2001
  • PAGES:
  • 81-86

2000

  • BOOKTITLE:
  • Proceedings of SSGRR 2000, International Conference on Advances in Infrastructure for Electronic Business, Science, and Education on the Internet, L'Aquila, July 31--August 6

1998